Publications

13 results for Akira Koseki

LEOPARD: Linking Experimental Observations with Predictive Algorithms to reveal Response Dynamics for the single cell
- - Vibha Anand
  - Akira Koseki
  - et al.
- 2025
- ISMB 2025
Improving Transcriptomic Foundation Models Through Gene-Level Error Analysis and Adaptive Masking
- - Michael Morris Danziger
  - Bharath Dandala
  - et al.
- 2025
- ISMB 2025
Designing a Multi-Agent AI Framework to Mine Scientific Literature and Experiment Datasets to Support and Enrich Single-Cell Analyses
- - Joao Bettencourt-Silva
  - Natasha Mulligan
  - et al.
- 2025
- ISMB 2025
Improving Health-Status Classification for Epithelial Cells of Inflammatory Bowel Disease using a Transcriptomic Biomedical Foundation Model
- - Toshiya Iwamori
  - Vibha Anand
  - et al.
- 2024
- ISMB 2024
Identifying Putative Gene Markers: A Biomedical Foundation Model-based Approach for Cell Type Annotation
- - Uri Kartoun
  - Akira Koseki
  - et al.
- 2024
- ISMB 2024
Effective In-Silico Gene Perturbation by Machine Learning Model Interpretation for Immunotherapies
- - Tanwi Biswas
  - Akira Koseki
  - et al.
- 2024
- ISMB 2024
Cross Dataset Verification of Cell Type Annotation using a Transcriptomic Biomedical Foundation Model: Inflammatory Bowel Disease Use Case
- - Akihiro Kosugi
  - Vibha Anand
  - et al.
- 2024
- ISMB 2024
Contextualizing Single-Cell Analyses: An AI Pipeline for Evidence Search from Literature and Gene Databases
- - Joao Bettencourt-Silva
  - Natasha Mulligan
  - et al.
- 2024
- ISMB 2024
DPM360: New Additions to Advanced Disease Progression Modeling
- - Akira Koseki
  - Italo Buleje
  - et al.
- 2022
- OHDSI Collaborator Showcase 2022
Variational Inference for Discriminative Learning with Generative Modeling of Feature Incompletion
- - Kohei Miyaguchi
  - Takayuki Katsuki
  - et al.
- 2022
- ICLR 2022