A fast machine learning workflow for rapid phenotype prediction from whole shotgun metagenomes
- Anna Paola Carrieri
- Will P. M. Rowe
- et al.
- 2019
- AAAI 2019
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18 results for Anna Paola Carrieri
Combining human cell line transcriptome analysis and Bayesian inference to build trustworthy machine learning models for prediction of animal toxicity in drug development
- 2019
- NeurIPS 2019
Combining explainable machine learning, demographic and multi-omic data to inform precision medicine strategies for inflammatory bowel disease
- 2022
- PLoS ONE
Challenges in benchmarking metagenomic profilers
- Zheng Sun
- Shi Huang
- et al.
- 2021
- Nature Methods
Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences
- Anna Paola Carrieri
- Niina Haiminen
- et al.
- 2021
- Scientific Reports
Using human in vitro transcriptome analysis to build trustworthy machine learning models for prediction of animal drug toxicity
- 2020
- Scientific Reports
Interpreting machine learning models to investigate circadian regulation and facilitate exploration of clock function
- Laura Gardiner
- Rachel Rusholme-Pilcher
- et al.
- 2021
- PNAS
Topological Signatures for Population Admixture
- Laxmi Parida
- Filippo Utro
- et al.
- 2015
- RECOMB 2015
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
- Justin P. Shaffer
- Louis-Félix Nothias
- et al.
- 2022
- Nature Microbiology
SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment
- Clarisse Marotz
- Pedro Belda-Ferre
- et al.
- 2021
- Microbiome