Probing omics data via harmonic persistent homology
- Davide Gurnari
- Aldo Guzmán-Sáenz
- et al.
- 2025
- Scientific Reports
Publications
44 results for Filippo Utro
BioSet2Vec: extraction of k-mer dictionaries from multiple sets of biological sequences via big data technologies
- Ylenia Galluzzo
- Raffaele Giancarlo
- et al.
- 2025
- BMC Bioinformatics
AutoXAI4Omics: an automated explainable AI tool for omics and tabular data
- James Strudwick
- Laura-Jayne Gardiner
- et al.
- 2024
- Briefings in Bioinformatics
Developmental mosaicism underlying EGFR-mutant lung cancer presenting with multiple primary tumors
- Risa Burr
- Ignaty Leshchiner
- et al.
- 2024
- Nat. Cancer
AI-enabled evaluation of genome-wide association relevance and polygenic risk score prediction in Alzheimer's disease
- Daniel E. Platt
- Aldo Guzmán-Sáenz
- et al.
- 2024
- iScience
Genetic events associated with venetoclax resistance in CLL identified by whole-exome sequencing of patient samples
- Jasneet Kaur Khalsa
- Justin Cha
- et al.
- 2023
- Blood
Evolutionary history of transformation from chronic lymphocytic leukemia to Richter syndrome
- Erin M. Parry
- Ignaty Leshchiner
- et al.
- 2023
- Nature Medicine
Distinct cellular dynamics associated with response to CAR-T therapy for refractory B cell lymphoma
- Nicholas J. Haradhvala
- Mark B. Leick
- et al.
- 2022
- Nature Medicine
A common methodological phylogenomics framework for intra-patient heteroplasmies to infer SARS-CoV-2 sublineages and tumor clones
- Filippo Utro
- Chaya Levovitz
- et al.
- 2021
- BMC Genomics
K-mer analyses reveal different evolutionary histories of alpha, beta, and gamma papillomaviruses
- Zigui Chen
- Filippo Utro
- et al.
- 2021
- Int. J. Mol. Sci.