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KNIGHT Challenge
Kidney clinical Notes and Imaging to Guide and Help personalize Treatment and biomarkers discovery

A new approach to benchmark the acceleration of scientific discovery for cancer biomarkers

  • About KNIGHT
  • The Challenge
  • Evaluation
  • Baseline
  • Organizers
  • ISBI Proceedings
  • Winners

Important Dates

Release of data, code, and metrics for training Nov. 15, 2021
Release of examples for submission files Jan. 21, 2022
Release of data and metrics for testing Jan. 31, 2022
Challenge workshop website goes live Feb. 01, 2022
Submission deadline for prediction results files Final Round 3 Feb. 28, 2022
Mar. 7 2022 23:59 PST
Manuscript submission deadline Mar. 16, 2022 23:59 PST
Mar. 20, 2022 23:59 PST
Notification of ISBI sub-proceedings acceptance Mar. 24, 2022
KNIGHT Workshop Mar. 28, 2022
Camera-ready submission to ISBI sub-proceedings Apr. 15, 2022
Publication of challenge outcomes Oct. 01, 2022

Like the KNIGHT Challenge?

Try the BRIGHT challenge for breast tumor images.

Evaluation

The challenge participants will be ranked based on performance of Task 1 measured by AUC (area under the receiver operating curve [14]). In the event of a tie between participants, the average of AUC of the five groups measured through one-versus-all classification (Task 2), will be used for ranking the tied participants. Participants are asked to submit: a short paper (no more than four pages),) titled manuscript.pdf, describing their methods and discoveries. After the submission deadline, the ranking and performance of both criteria on the test data will be published. The participants will also need to submit a CSV file per task titled <task number>.csv containing a row with class scores for each patient in the test set. The rows must adhere to the following scheme:

Task 1 predictions file:
[case_id,NoAT-score,CanAT-score]

Task 2 predictions file:
[case_id,B-score,LR-score,IR-score,HR-score,VHR-score]

Where “case_id" represents the sample (e.g. case_00000) and all scores represent the probability of a patient to belong to a class. The evaluation script, implemented using FuseMedML [15], can be used during training and as a sanity check.

The script can be found here: https://github.com/IBM/fuse-med-ml/tree/knight_eval/fuse_examples/classification/knight.

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